Insertion junction: CLIP2.030089_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030089
Chromosome:chromosome 12
Location:9331953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541950 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCGGTCGTACCGGAGCCTTCACCCTTGGCACCCTGCCCGTCCGTGCCG
Internal bar code:AAATAGATACTGAGCGGCCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2019
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCGACTTGTTGGAGAGT
Suggested primer 2:ATTGGAATGCAAGGGAGGGG