Insertion junction: CLIP2.030090_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030090
Chromosome:chromosome 11
Location:1894525
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467785 (1 of 3) PTHR10625:SF102 - HISTONE DEACETYLASE 10 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCATGCTCAAGCACTTGGGGCCCTCCAGTGAGTGCTTCGGGCCCGCGG
Internal bar code:CTCGGGCTCGCTTGCAGTCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2354
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCACACCACTTCCATCC
Suggested primer 2:AGGACGGAGGGGATTCTTCA