Insertion junction: CLIP2.030100_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030100
Chromosome:chromosome 9
Location:3276489
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395028 (1 of 2) PF02470 - MlaD protein (MlaD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCGTGCGGCATACGGCGTGACCCGGCTGCCGACTGATTGTTCCACTC
Internal bar code:AATAACAAAAAGCGGGAGCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:613
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAATGAAGTGCCCACGCC
Suggested primer 2:GGCTTTCCGTCCTACCACTC