Insertion junction: CLIP2.030101_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030101
Chromosome:chromosome 12
Location:4014253
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516000 (1 of 2) PF07978 - NIPSNAP (NIPSNAP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCATCCCACGCGGTTCTCGAGGTGGCAGTGAGCGTGCGTTTGGGCTT
Internal bar code:AGCGTTAGTCCGCAGGTCCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2194
LEAP-Seq percent confirming:88.75
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTACTGAATTGCACGTCG
Suggested primer 2:GATATCCACCCCCAGGCATG