Insertion junction: CLIP2.030122_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030122
Chromosome:chromosome 4
Location:3840515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229948 (1 of 2) 1.3.1.89 - tRNA-dihydrouridine(47) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTAGCCACGATCCCGCCGCCGCCGCCCCTGGCCCTGTCCGCGCCGCT
Internal bar code:CGATGAGTAGTTTTTGGTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:219
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATGTCGTATTGTCGCAC
Suggested primer 2:CCATGCTGTGTGTGTGTGTG