Insertion junction: CLIP2.030123_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030123
Chromosome:chromosome 17
Location:1703961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708200 HFO36,HFO26 (1 of 33) K11254 - histone H4 (H4); Histone H4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGCAAGGGCGGCGCCAAGCGCCATCGCAAGGTGCTCCGCGACAACAT
Internal bar code:TAGTCAACTTCGCGATGGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3110
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGGATGCACCTGACCAT
Suggested primer 2:TCCTTGGGCATGATGGTCAC