Insertion junction: CLIP2.030123_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030123
Chromosome:chromosome 17
Location:1703962
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708200 HFO36,HFO26 (1 of 33) K11254 - histone H4 (H4); Histone H4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCTTGCCGCCCTTGCCACGTCCGGACATGTTTGCTGGTTTGTTAGAG
Internal bar code:ACAAACCTGTGCGTTTGGTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1550
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGGGCATGATGGTCAC
Suggested primer 2:CTGTGGATGCACCTGACCAT