Insertion junction: CLIP2.030134_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030134
Chromosome:chromosome 12
Location:8536504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549200 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCAGCCGCGTGCCCCCGCACTCACCGCTGCCTCCACGTGTCGTACGC
Internal bar code:AAGTGGGCGGGGAGGACCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2270
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGAGTGGGAGTGGTTGG
Suggested primer 2:CCTTACCCAGGCCTTGTCTG