Insertion junction: CLIP2.030135_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030135
Chromosome:chromosome 2
Location:5187937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112100 C1a-86,FAP101 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype; Flagellar Associated Protein 101 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGCGCCCGACCCCGCCACAGCCGCCGCCGTGGCTCCGGCGGGCGTGG
Internal bar code:TCGTTATTGTAATAACCGCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1451
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGCGGTCGGTTTATGTC
Suggested primer 2:TCCTGCCGGGACCAATTTAC