Insertion junction: CLIP2.030138_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030138
Chromosome:chromosome 1
Location:4324115
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029400 (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAATTGGGCCCGGGCGCATAATGCCCCATCACCCCCATGTCTCCTGCC
Internal bar code:TTAGATCCTAGGTCCAGCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:195
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGACCTGGGGTGTTAACG
Suggested primer 2:AGGAGCTGGAGGAAGAGGAG