Insertion junction: CLIP2.030138_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030138
Chromosome:chromosome 1
Location:4324129
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029400 (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGAAAGCCCACCCAGTCACGAAGGGGGTGCTTGTGTGTGTAGGTGTAG
Internal bar code:TTAGATCCTAGGTCCAGCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1706
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGCTGGAGGAAGAGGAG
Suggested primer 2:GGAGACCTGGGGTGTTAACG