Insertion junction: CLIP2.030140_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030140
Chromosome:chromosome 12
Location:3800407
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514600 (1 of 1) 2.7.4.27 - ([Pyruvate, phosphate dikinase] phosphate) phosphotransferase / Pyruvate, phosphate dikinase regulatory protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGATTGGATTGCACTTGCGTTGCGTCTCCCACAGACCTGCTGATCCT
Internal bar code:TTCGACTTTGACTTCCGGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:530
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCCAGGAGTACAAGCTT
Suggested primer 2:AACTGGAATGCACTAGCCCC