Insertion junction: CLIP2.030144_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030144
Chromosome:chromosome 14
Location:3490029
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630650 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGGAGGCGAGCAACCTAATGGGGGATGGCGGGCAGGATTGCGCGTTG
Internal bar code:CCGCTCACAAGAGAGACGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1086
LEAP-Seq percent confirming:4.16667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTCCGGAGCTGGTACTG
Suggested primer 2:CGGGTACTTGCTCGTGCTAA