Insertion junction: CLIP2.030145_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030145
Chromosome:chromosome 6
Location:2428271
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268800 FLA17,IFT139,FAP60 Intraflagellar transport protein 139; (1 of 1) PTHR14699//PTHR14699:SF0 - STI2 PROTEIN-RELATED // TETRATRICOPEPTIDE REPEAT PROTEIN 21 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAATCTACAACAACCCCGCAGCCAAAGCCAAGCAGCCATTGTGCGCCA
Internal bar code:GAAATGGTGTTCGGAGCTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:579
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGGAGGAGAAGGAGGAG
Suggested primer 2:AGGACAGCAAACGGATCTGG