Insertion junction: CLIP2.030149_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030149
Chromosome:chromosome 17
Location:1966907
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g710200 IAD1 Indoleamine 2%252C3-dioxygenase; (1 of 1) 1.13.11.11 - Tryptophan 2,3-dioxygenase / Tryptophanase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGAGGCAAGGCGAGGCCGCAGTGCCAGTCAGATACCATAAGCGTGACT
Internal bar code:GTCTCATCCCCGGTTTAGAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:814
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTACCAAGTGGAAGCCCG
Suggested primer 2:AATGCATTTCCCGCAACCAC