Insertion junction: CLIP2.030150_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030150
Chromosome:chromosome 9
Location:2694476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391753 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCGTGACATGGAGCAGCATCTTCGGTCCATGGCGGAGCAGGTGGGCC
Internal bar code:GGCGTGTTTGCCTGCGGGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1037
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTAGCTTGTATGCCCCGT
Suggested primer 2:TTTGCGTACAGGTTGTGGGT