Insertion junction: CLIP2.030170_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030170
Chromosome:chromosome 2
Location:1057341
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g080300 (1 of 5) PTHR10791 - RAG1-ACTIVATING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAACATGAGGGAGTTCAGTGCTGAACTGCTGATGTGATGATGCCGGT
Internal bar code:GCTGTGAGGTATGCAAGGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4187
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCGGTCACGTTGAGTAG
Suggested primer 2:AGTGCTAGAAGGGGCTCGTA