Insertion junction: CLIP2.030170_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030170
Chromosome:chromosome 11
Location:1526679
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g468700 CPLD65,HCAR1 7-hydroxymethyl chlorophyll a reductase; (1 of 1) 1.17.7.2 - 7-hydroxymethyl chlorophyll a reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCAGTGCTTCCATACACGTCGAGTCATGCCCCCGCTGCCGTACAGGT
Internal bar code:TTAAGCAATCTTCTGGGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:66
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTTCTGACGCCTTACAGT
Suggested primer 2:CACAAGCAACACCCCACATG