Insertion junction: CLIP2.030174_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030174
Chromosome:chromosome 3
Location:3832402
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170100 (1 of 1) PTHR31840//PTHR31840:SF1 - FAMILY NOT NAMED // COILED-COIL DOMAIN-CONTAINING PROTEIN 97 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAAATGCAATCGCGCTTCCTGCTGGGGCAGGATGGTGCGTTTGTGGA
Internal bar code:GTGAGTTGATTTTGAAAGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2092
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAAAGCACCCCAAGTCCG
Suggested primer 2:CGGTTCAGTGACTTCCTGCT