Insertion junction: CLIP2.030176_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030176
Chromosome:chromosome 12
Location:364320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g495701 (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACTCTGGCAGCGTGTCAGTCGACGAGCACGTCGATGAGTGCTCAAAAA
Internal bar code:GACCTTTCACTGACATACTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1524
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGAGCGGTTGTAAAGTCA
Suggested primer 2:GTTGGTGTTTGTGACGGCTC