Insertion junction: CLIP2.030199_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030199
Chromosome:chromosome 4
Location:2175358
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220000 (1 of 4) IPR000719//IPR001245//IPR002290//IPR011009 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCCGAGCCACCCCGGTAGGCGACGGGGGGAGCGAAACCTGGTCGTGA
Internal bar code:AGGATCGGGAGGACAGTGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2042
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGAGGACATGAAGGTGG
Suggested primer 2:CCTGTGTGTGTGCATGTGTG