Insertion junction: CLIP2.030202_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030202
Chromosome:chromosome 11
Location:2235314
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467720 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCCAACTTCCAAATGCAAGTCCCATCCGCGCACCTGTCTGCCATCAC
Internal bar code:CCGGATCATCGTTGGACTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1157
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCTTCCCTCATTCGCTT
Suggested primer 2:CCATGAATCCACCCTTCCCC