Insertion junction: CLIP2.030204_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030204
Chromosome:chromosome 9
Location:3654148
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397105 (1 of 19) 1.14.14.1 - Unspecific monooxygenase / Xenobiotic monooxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCACGTGCTGCATACAGATCGCCGCCATGGACACCACAGCCTTCCTC
Internal bar code:ATGGTGTGTCGCCTAGGGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:520
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTAGGAGGCGAAGTTGGC
Suggested primer 2:CGTTGAGGCGCTATGCTTTC