Insertion junction: CLIP2.030208_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030208
Chromosome:chromosome 1
Location:5159505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036050 MLH1 DNA mismatch repair protein; (1 of 1) K08734 - DNA mismatch repair protein MLH1 (MLH1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTTGTAGAGGCGGCGGGTGGACAGGAAACGCCCCCGTGGTGGCAGTGG
Internal bar code:CTTACCCCGCTCCCTCCACCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:143
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCCTGTTCTATGTGCGC
Suggested primer 2:TGCCTTGTCAACGTCTGGTT