Insertion junction: CLIP2.030209_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030209
Chromosome:chromosome 17
Location:5700435
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740510 DIV23,APC3,CDC27 Subunit of anaphase-promoting complex; (1 of 1) K03350 - anaphase-promoting complex subunit 3 (APC3, CDC27) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGTAGCCAGGAACAGTAGAAGTGGGGCAGGGCTCAGCGAGGGCATGC
Internal bar code:ATTCCCGGCCTACCTTTTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1364
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTGCCAGTGTATTGGGT
Suggested primer 2:CCACATCCACACGTACAGCA