Insertion junction: CLIP2.030216_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030216
Chromosome:chromosome 13
Location:3195845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g585250 (1 of 1) PF08005 - PHR domain (PHR) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTCGGGCGTACGCCCAAGCAAGTACGTCGTATGATTGCGCCTGTGCG
Internal bar code:AGTAGAGTTAAAGTGGCTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:127
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTAGTACCCCGTGCACAG
Suggested primer 2:TTTGCGACATAGCTCCTGCA