Insertion junction: CLIP2.030220_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030220
Chromosome:chromosome 13
Location:2597257
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580700 DAL2 allantoate deiminase; (1 of 1) 3.5.3.9 - Allantoate deiminase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACAGGCAGCCGTAACATACTCTCGCGTACGCATTGACACCACATACAC
Internal bar code:ACGTGAGTAAGGAGCCTCATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1217
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCTTGGTGACCTAAGCC
Suggested primer 2:AGCCCTTGAGAGAATGTGGC