Insertion junction: CLIP2.030230_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030230
Chromosome:chromosome 6
Location:3622129
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278137 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase CDS
lncRNA_TCONS_00179413 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGGAGGACGGACGCGTGCTCCCCTACCTGCTGGCCGTGATGGCGGCG
Internal bar code:TTGAATGGGGCCTGGCTTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1967
LEAP-Seq percent confirming:98.7179
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAGTACTCGCGCTGTAT
Suggested primer 2:CCCTTACGGCCTTTCCCATT