Insertion junction: CLIP2.030234_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030234
Chromosome:chromosome 13
Location:4932682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605600 OAS1 (1 of 1) IPR018952//IPR026774 - 2'-5'-oligoadenylate synthetase 1, domain 2/C-terminal // 2'-5'-oligoadenylate synthase; 2'-5'-oligoadenylate synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCACGCAGGACACGACGTGATGAGTCCCTCAAGCCTTGGCCAACACGT
Internal bar code:CAAGCCGGCTTAGTTTCAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1842
LEAP-Seq percent confirming:43.299
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:55
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGTTGCAGACACCGACC
Suggested primer 2:CCAGGAAAGCCTCAGCATCA