Insertion junction: CLIP2.030242_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030242
Chromosome:chromosome 3
Location:3236482
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165350 (1 of 3) 1.1.1.30 - 3-hydroxybutyrate dehydrogenase / D-beta-hydroxybutyrate dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAAACGCGTCGAGGTGGCGCATGCTGTGTGGACGGCGGGGTGATGTGT
Internal bar code:GTACGGTACGTAACTCCTTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1902
LEAP-Seq percent confirming:95.1219
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTCCGTGAATTTGAGCC
Suggested primer 2:CACATGCTGATACGCACACG