Insertion junction: CLIP2.030245_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030245
Chromosome:chromosome 6
Location:2356777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g267900 (1 of 1) PTHR12859:SF0 - PROTEIN PRAF-3, ISOFORM A CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGTGGCGGCGCTGCTGCTGGTGGGCGGGCTTCTAGTGTACTGGAGCCA
Internal bar code:ATTGTATTCAGCCTTTTCCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1927
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGAACTGGGCGAGTACACAA
Suggested primer 2:ATACCCTGTGTGACAGCAGC