Insertion junction: CLIP2.030246_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030246
Chromosome:chromosome 3
Location:2950343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162900 (1 of 3) PTHR11017//PTHR11017:SF145//PTHR12203//PTHR12203:SF13 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED // KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // F10K1.7 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTGTCTCCTGTGGTCTGGGGGGTCTGCGGTTTGTGAGGGTGTGCTCG
Internal bar code:TGATCTCTCTCATGTCTGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2662
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CTTACCCGCGATAAGCCTGT
Suggested primer 2:TGCACACACACCTGGACTTT