Insertion junction: CLIP2.030246_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030246
Chromosome:chromosome 3
Location:2950355
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162900 (1 of 3) PTHR11017//PTHR11017:SF145//PTHR12203//PTHR12203:SF13 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED // KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // F10K1.7 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGTCCTAAACCCCCCGCCCCCGACACCGGGATTGGCTACGTTACCCGC
Internal bar code:TGATCTCTCTCATGTCTGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1015
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACACACACCTGGACTTT
Suggested primer 2:CTTACCCGCGATAAGCCTGT