Insertion junction: CLIP2.030248_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030248
Chromosome:chromosome 13
Location:3906365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589870 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTACGGTACGGACCTGGCGGTTGCCATCGCGGTTGCACTCGCCGATCAC
Internal bar code:TCACTGGCCCCGGGGTAGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1468
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACGTCACTGCGTAAAGT
Suggested primer 2:CCTTCCCCCATGCATCTTGT