Insertion junction: CLIP2.030254_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030254
Chromosome:chromosome 14
Location:1242760
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g616000 (1 of 35) IPR001763 - Rhodanese-like domain 5'UTR/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGCAGCGGCGGGGACTTCGAGGCGCGGCTGGCGCCGCACCTCCAGGG
Internal bar code:TATCATACGATAATTTAATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2207
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCGCTTTCTTGAGTCCCA
Suggested primer 2:GCCTAGTATCAGCGGGTGAC