Insertion junction: CLIP2.030256_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030256
Chromosome:chromosome 6
Location:6462261
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293900 (1 of 1) PTHR23333:SF4 - UBX DOMAIN-CONTAINING PROTEIN 11 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCTCCCGAGGATGGCCCAGCTCCGGCCCCGCCTGTGGCGGCACCTG
Internal bar code:ACTTCGTTCTTTAACATCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1902
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGAGTACGGTAGTGCGAG
Suggested primer 2:TCGTCTACTTTGCCCTGCAG