Insertion junction: CLIP2.030259_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030259
Chromosome:chromosome 5
Location:452746
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243900 (1 of 83) IPR029044 - Nucleotide-diphospho-sugar transferases intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCAAACCAAGCCAAACTAGCGTAGCACGGGCACAAGCGACAGGGGGCG
Internal bar code:TTGAAGCTGTCTAAGTATTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:56
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCAGTCATCTAGGACCCA
Suggested primer 2:CCAAACCCCTCCTTCTCCAC