Insertion junction: CLIP2.030264_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030264
Chromosome:chromosome 6
Location:1991099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264950 HTA13,HTA12 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTAAGCGGGCTCATGCTTCGCTGCACGCGTGTAGCTACAGCTGTCACG
Internal bar code:ATCAAGAGACTGAGGCCGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1456
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TACAACATGGGCTTACGCGT
Suggested primer 2:CAACCCAACACAATGGCTGG