Insertion junction: CLIP2.030281_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030281
Chromosome:chromosome 4
Location:3485404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g227900 PF20 WD-repeat protein of flagellum central pair; (1 of 6) IPR001680//IPR015943//IPR017986//IPR020472 - WD40 repeat // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain // G-protein beta WD-40 repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACGCCAGCCCCCACTCCTCCACCTCCACGCCAGCTTGCCGCCTTGCT
Internal bar code:GGTGGTAATATAGTGAGTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:106
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGACTTCCTGCGCAACT
Suggested primer 2:CTCATGCTTCCTCCCTGCTC