Insertion junction: CLIP2.030282_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030282
Chromosome:chromosome 16
Location:7728524
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686734 (1 of 30) PTHR24349//PTHR24349:SF79 - SERINE/THREONINE-PROTEIN KINASE // NITROGEN NETWORK KINASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGTGGCGTAGGGTGGGTGGGAAGGTGTGGAGGTGTGGAGGGCGGGGT
Internal bar code:CCCGGTTATATTAAATACTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:478
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGGTTTCGATTGGTATGC
Suggested primer 2:CCAGACTGCAGCTGTAACCA