Insertion junction: CLIP2.030286_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030286
Chromosome:chromosome 3
Location:9117534
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200879 CSR10 Carbohydrate sulfotransferase-related 10; (1 of 1) IPR000104//IPR000863//IPR012884//IPR027417 - Antifreeze protein, type I // Sulfotransferase domain // Excisionase-like // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCACGGCCGCTGCGGGCTGTGTGGCCAGCTGGCTTGCGTACAGCACCA
Internal bar code:CATATGCGGACCCGTAGCATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1470
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAATGTTTGTGGCTGGCG
Suggested primer 2:ACGCACTTGACACCCTGTAG