Insertion junction: CLIP2.030289_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030289
Chromosome:chromosome 17
Location:2480208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715400 (1 of 1) PTHR22957//PTHR22957:SF293 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // GTPASE ACTIVATOR PROTEIN OF RAB-LIKE SMALL GTPASES-LIKE PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGATGCTGCTGCTGCAGCTGCGGCGTGAGGTGGCGTGGGAGGACGTG
Internal bar code:GTATGTACCTGCTGTAAAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:764
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTCACTCGTGGTCACAA
Suggested primer 2:GAAACGCATTGCCACACTGT