Insertion junction: CLIP2.030304_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030304
Chromosome:chromosome 7
Location:1194502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321350 (1 of 2) 3.1.3.1 - Alkaline phosphatase / Phosphomonoesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAAGAGGGCGAGTTAGCGGTGGCACTGCGACTAAACGGGGTCGAGGC
Internal bar code:TCCCTCACGCGTATGGCCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2174
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGGCAGACTCACAGACG
Suggested primer 2:TTCGCACACGGACATACACA