Insertion junction: CLIP2.030306_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030306
Chromosome:chromosome 10
Location:2557481
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g436400 (1 of 2) PTHR13271//PTHR13271:SF11 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACACAGAAAGGAGTGAAAACCTCTGCTTTACCGCCAATTTTGCAGCG
Internal bar code:AGAGGCTTATAGGGGTGTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3620
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AACCGGAATGCCTATGTGCA
Suggested primer 2:CCTGATGACTTTTCCGGGCT