Insertion junction: CLIP2.030311_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030311
Chromosome:chromosome 16
Location:7610880
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684715 DCL2 Dicer-like protein; (1 of 4) 3.1.26.3 - Ribonuclease III / RNase III CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTACGGTATACTGCTGGCGCGGCTTGATGAGTCAGCCATTCCCCTCCC
Internal bar code:CGGGTCACAGAGACACGCGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:371
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GATCAGAGCCTCCATCACCG
Suggested primer 2:CGTAAACCCTCCCCCTGTTC