Insertion junction: CLIP2.030312_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030312
Chromosome:chromosome 1
Location:3842499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025200 MMP4 Metalloproteinase of VMP family; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGTTTGCTTTGCACACACGCGTGCTGCACGGCCGCCGGTCCACCCATG
Internal bar code:AAAGCAAAGAGTGATTGTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3047
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TACCAATACCGAGGCGATGC
Suggested primer 2:GCGGCTAGCCAATTGGAATG