Insertion junction: CLIP2.030317_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030317
Chromosome:chromosome 3
Location:4604882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176651 MYSM1 (1 of 1) PF00249//PF01398 - Myb-like DNA-binding domain (Myb_DNA-binding) // JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB); Histone H2A deubiquitinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGTAGGGGTTCATAGTGACGCCTTGCGCGGCCAGTGCACGAGCAAGG
Internal bar code:TGGATATTTCATGAGACGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:719
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACTAGCGCTTTCGACAA
Suggested primer 2:GAGTGTGTAAGGGGTGGGTG