Insertion junction: CLIP2.030320_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030320
Chromosome:chromosome 11
Location:3654353
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478400 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTGGTTTGTCTGGTGGATGGCACGGGCGGATGGGGTGAATAATTAAA
Internal bar code:GTCAGATGTTCAGTTGCCCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:268
LEAP-Seq percent confirming:62.963
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGTTGTCCATGTCTGCA
Suggested primer 2:GAGCAGCCATACTACCGGTC