Insertion junction: CLIP2.030321_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030321
Chromosome:chromosome 7
Location:3660231
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800819 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGGAGGCAGCGCGGACTGCTGGCGCCCGCAGGGAAGGGCGAGAGCGC
Internal bar code:GGCTTCTTAATAGAAGTGAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2085
LEAP-Seq percent confirming:90.2778
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCACGGTAAGAACGGTT
Suggested primer 2:AGGTACTTGTCCATGCAGGC