Insertion junction: CLIP2.030326_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030326
Chromosome:chromosome 10
Location:1760222
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g430501 (1 of 1) PTHR22904//PTHR22904:SF331 - TPR REPEAT CONTAINING PROTEIN // CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN 3'UTR
Cre10.g801118 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTAGCTCGTGACGCACAGTGATGGGCAACCAGAGGCCTGCATCCGCCG
Internal bar code:CGTGCTCCGGGAATGGCACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2078
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:CGACGCACGTGTTGTTTCTT
Suggested primer 2:GTTGTGGAAGACGAGAGGGG